Autores
Vega-oliveros, C. (UNIVERSIDAD NACIONAL DE COLOMBIA BOGOTÁ)  ; Sánchez-martínez, J.D. (UNIVERSIDAD AUTONOMA DE MADRID)  ; Bueno, M. (UNIVERSIDAD AUTONOMA DE MADRID)  ; Alvarez-rivera, G. (UNIVERSIDAD AUTONOMA DE MADRID)  ; Morales, D. (UNIVERSIDAD AUTONOMA DE MADRID)  ; Chegwin-angarita, C. (UNIVERSIDAD NACIONAL DE COLOMBIA BOGOTÁ)  ; Ardila-barrantes, H. (UNIVERSIDAD NACIONAL DE COLOMBIA BOGOTÁ)  ; Ibáñez, E. (UNIVERSIDAD AUTONOMA DE MADRID)  ; Cifuentes, A. (UNIVERSIDAD AUTONOMA DE MADRID)
Resumo
Substrate variation can deeply affect the metabolites that fungus expresses. The 
mushroom Lentinula edodes was obtained by submerged fermentation in two different 
culture media. This work aims to explore the metabolite profile with high-
resolution chromatography. We cultured mycelium in two media and after that, we 
analyzed extracts by fractioning them with different solvents. The analysis 
employed UHPLC-qTOF-MS/MS. The annotation of metabolites allowed us to determine 
that detected compounds had significant differences in the metabolite profile of 
the cultured mycelia, and their correlation with the nutraceutical potential. We 
found in the mycelia interesting compounds with nutraceutical reports. The results 
constitute the first report of metabolomic analysis in mycelium of L. edodes
Palavras chaves
Shiitake; Nutraceutical; Metabolomics
Introdução
Among the challenges of working with fungi and yeasts is the choice of a culture 
medium that favors their production and scaling and the biosynthesis of proteins 
or metabolites, which are currently of great interest to the food and 
pharmaceutical industries. (CHANG, 2009; GERBEC et al., 2015; HANSEN et al., 
2015). For macromycetes, substrate variation can radically affect the proteomic 
or metabolic profile as a consequence of the ability of the fungus to adapt to 
the environment in which it is cultivated (ARANGO et al., 2013; GREGORI; 
ŠVAGELF; POHLEVEN, 2007). The mushroom Lentinula edodes was biotechnologically 
obtained by submerged fermentation, or SF, in two culture media of different 
compositions. In previous work, we determined that cultivation in the two media 
evidenced significant differences in biomass yield and the proteomic profile. 
Also, we found nutraceutical tendencies when in vitro analyses of the mycelium 
extracts were applied. Such results were antioxidant capacity against oxygen 
radicals (ROS) with ABTS and ORAC inhibition assays, and nitrogen radical 
inhibition (RNS) with the nitroprusside assay, as well as inhibition of 
Lipooxygenase (LOX) and 3-hydroxy-3-methylglutaryl-CoA reductase (HMGCR) 
enzymes. The objective of this work is to explore the profile of medium and high 
polarity metabolites in the mycelium obtained, to construct a database of 
compounds that can be found in this vegetative tissue utilizing a non-targeted 
search using liquid chromatography and high-resolution mass detectors, and 
finally to statistically correlate the metabolites that could be involved with 
the results obtained previously.
Material e métodos
Mycelium of L. edodes was cultured in submerged fermentation in two different 
liquid culture media: bienestarina flour (BIE), which corresponds to a food 
supplement type flour developed in Colombia containing wheat flour, soy flour, 
corn starch, whole milk powder, linseed oil powder, vitamins, and minerals. 
(ICBF, 2020) at 30 g/L concentration (CHEGWIN-ANGARITA; NIETO-RAMÍREZ, 2014) and 
a second medium containing glucose (20 g/L), peptone and yeast extract. (0.5 g/L 
each one) (GPY) (SUÁREZ-ARANGO, 2012). The mycelium obtained from these two 
media was lyophilized and macerated in liquid nitrogen for subsequent extraction 
by fractionating the metabolites present in the mycelium, using solvents of 
different polarity such as dichloromethane (DCM), ethanol (EtOH), and water. The 
extracts were subjected to the study of their composition using UHPLC-qTOF-MS/MS 
according to the conditions described in (BALLESTEROS VIVAS, 2020). For the 
identification, a general database was constructed, and the specific databases 
for L. edodes were cited in (FUKUSHIMA-SAKUNO, 2020; KWIECIEN et al., 2015; LI 
et al., 2019; TANG et al., 2020; ZHANG et al., 2020). Monoisotopic masses and 
MS/MS fragmentations were reviewed and compared with those reported in NIST, 
HMDB, Metlin, and MassBanck. Finally, determinations were made in triplicate and 
for metabolomic studies supervised and unsupervised (p <0.05), univariate and 
multivariate analyses were performed. Data obtained from LC-MS/MS metabolites 
were normalized to signal abundance following a sample-centered approach by 
dividing the area of each relative intensity by the total area obtained from the 
sample, according to (DOWLE; WILSON; THOMAS, 2016). This study considered the 
compounds present in 2 of the three biological replicates. Univariate (ANOVA) 
and unsupervised multivariate (PCA) tests with supervised analysis (PLS-DA) of 
the data obtained were applied to determine differences between samples and 
correlations between biological activity and metabolites detected in the 
analyses. Statistical analyses were performed using the online application 
Metaboanalyst (https://www.metaboanalyst.ca/).
Resultado e discussão
We confirm that metabolite composition variety is determined by the polarity of 
every extract analyzed and the nature of each liquid media due to the annotation 
of the metabolites. We could make a tentative identification of a total of 183 
signs corresponding to compounds and their adducts for the extracts from the 
mycelium grown in the two media. We established by PCA analysis statistical 
differences between the compounds detected for the three different fractions 
analyzed from the mycelium obtained in the two substrates. In this first part, 
we detected sulfur-type compounds as compounds strongly related to this fungal 
specie, but in smaller amounts than what has been reported for extracts of 
fructifications (mushrooms) of L. edodes. Also, we detected phenolic-type 
compounds, a flavone, fatty acids, sterols, monosaccharides, and amino acids 
previously reported, and potentially lactone-type compounds that have not been 
reported. Differentially, the metabolites detected along with adducts in the 
mycelium in GPY were 181 and BIE 190, and a greater variety of fatty acid-type 
compounds were detected in the mycelium obtained in BIE as well as a higher 
detection of sterols in the mycelium obtained in GPY.
According to previous results, possible correlations were established between 
some of the detected compounds with biological activities studied in the same 
fungus extracts, according to the correlation studies performed by PLS-DA. In 
the antioxidant activity (inhibition of ROS and RNS) the correlated compounds 
were nitrophenols, benzenoids, polyols, tricarboxylic acid derivatives, some 
amminoacids, secondary alcohols, dipeptides, pyrimidine nucleosides, fatty 
acids, flavonoids, vitamin D derivative, 1,2-dithiol-3-thiones, hydroxy acids, 
polyketides, naphthofurans, phenylpropanes, butyrolactones, shikimic acid, amino 
alcohols, glycosphingolipids, fatty acylglycosides and Laurolactam-type 
compound. Enzyme inhibition involved various compounds in LOX inhibition related 
to fatty acyls, o-glycosyl compounds, prostaglandins, hydroxyeicosatrienoic 
acids, alpha-, omega-dicarboxylic acid, fatty amides, and sterol lipids. HMGCR 
inhibition correlated with amino acids and derivatives, diglycerides, carboxylic 
acids, fatty acids, tricarboxylic acids and derivatives, fatty acylglycosides, 
secondary alcohols, ketoacids, ketone alcohols, again the laurolactam type 
compound and vitamin D and derivatives. Some of them shared with those 
correlated with antioxidant activity. 
On the other hand, the annotation of the detected compounds allowed to establish 
significant differences between the compounds present in the mycelium that may 
be related to or influence the nutraceutical potential of this biomass, finding 
compounds previously reported to have biological activity in this species, as 
well as others not reported but that have been reported as compounds with 
nutraceutical character, mainly in the mycelium obtained in GPY (VEGA OLIVEROS, 
2021). 
Conclusões
The results reported in this work constitute the first report of metabolomic 
analysis in vegetative tissue (mycelium) of L. edodes obtained in submerged 
fermentation and can be used to perform statistical correlations to investigate 
groups of compounds that may have nutraceutical potential.
Agradecimentos
Minciencias – Conv. 785 Doctorados Nacionales 2017, FoodOmics lab – PhD. Alejandro 
Cifuentes and Department of Production and Characterization of Novel Foods – PhD. 
Cristina Soler-Rivas, CIAL, Universidad Autónoma de Madrid
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